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I don't see much of a problem there. You just need a plan before you start. I dual boot Windows 2K and Linux all the time using the Windows bootloader. I have never tried 98 with 2K and Linux using the windows bootloader, but I don't see why you could not. LILO or GRUB could do this as well. You might want to think about investing in System Commander. It will give you some really nice tools as well as a great bootloader. You can add or remove operating systems very easily and you don't have to worry about what order you install them in.
Hope that helps,
freezinbutt
p.s. What version of Linux are you going to use?
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